Vertical decorative line
Research Center for Complex Molecular Systems and Biomolecules
Center for Biomolecules and Complex Molecular Systems   
Supported by the Ministry of Education, Czech Republic      
Decorative element
Decorative element
Decorative element Research | Papers | People | Events | Archive | Teach | Contact   
Decorative element
Empty gif
Empty space gif.
Abstract of the article
Empty gif Empty gif
Benchmark database of accurate (MP2 and CCSD(T) complete basis set limit) interaction energies of small model complexes, DNA base pairs, and amino acid pairs.

Jurecka, P.; Sponer, J.; Cerny, J. etc., Physical Chemistry Chemical Physics, 8 1985 - 1993 (2006)

MP2 and CCSD(T) complete basis set (CBS) limit interaction energies and geometries for more than 100 DNA base pairs, amino acid pairs and model complexes are for the first time presented together. Extrapolation to the CBS limit is done by using two-point extrapolation methods and different basis sets (aug-cc-pVDZ-aug-cc-pVTZ, aug-cc-pVTZ-aug-cc-pVQZ, cc-pVTZ-ccp-VQZ) are utilized. The CCSD(T) correction term, determined as a difference between CCSD( T) and MP2 interaction energies, is evaluated with smaller basis sets (6-31G** and cc-pVDZ). Two sets of complex geometries were used, optimized or experimental ones. The JSCH-2005 benchmark set, which is now available to the chemical community, can be used for testing lower-level computational methods. For the first screening the smaller training set (S22) containing 22 model complexes can be recommended. In this case larger basis sets were used for extrapolation to the CBS limit and also CCSD(T) and counterpoise-corrected MP2 optimized geometries were sometimes adopted.


<< Go back
Empty space gif.
Empty gif
Decorative element